Examinando por Materia "Genotypes"

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Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
(John Wiley & Sons Inc., 2023-04-04) Paredes Espinosa, Richard; Gutiérrez Reynoso, Dina Lida; Atoche Garay, Diego Fernando; Abad Romaní, Yudi Gertrudis; Girón Aguilar, Rita Carolina; Flores Torres, Itala; Montañez Artica, Ana Gabriela; Arbizu Berrocal, Carlos Irvin; Amasifuen Guerra, Carlos Alberto; Poemape Tuesta, Carlos Augusto; Guerrero Abad, Juan Carlos
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
(John Wiley & Sons Inc., 2023-06-06) Paredes Espinosa, Richard; Gutiérrez Reynoso, Dina Lida; Atoche Garay, Diego Fernando; Mansilla Córdova, Pedro Javier ; Abad Romaní, Yudi Gertrudis; Girón Aguilar, Rita Carolina; Flores Torres, Itala; Montañez Artica, Ana Gabriela; Arbizu Berrocal, Carlos Irvin; Amasifuen Guerra, Carlos Alberto; Maicelo Quintana, Jorge Luis; Poemape Tuesta, Carlos Augusto; Guerrero Abad, Juan Carlos
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.
Comparative analysis of key fiber characteristics in white pima cotton (Gossypium barbadense L.): Native accessions from the Peruvian Amazon
(John Wiley & Sons Inc., 2024-05-19) Morales Araníbar, Luis; Nieves Rivera, Marite Yulisa; Soto Gonzales, Hebert Hernán; Morales Araníbar, Carlos Genaro; Linares Gutiérrez, Nataniel; Gamarra Gomez, Francisco; Zuffo, Alan Mario; González Aguilera, Jorge; Steiner, Fabio
The fiber quality of cotton (Gossypium barbadense L.) native to the Peruvian Amazon region is one of the most versatile and essential natural fibers in the Peruvian textile industry. There is little information about the fiber quality traits of cotton genotypes native to the Peruvian Amazon region. This study investigated the fiber quality traits of Peruvian Pima cotton accessions native to the Amazon region of the La Convención Province, Cusco, Peru, to determine the lines with the greatest potential for improving fiber quality in cotton genetic breeding programs. A total of 14 cotton accessions with white fiber color, being 12 accessions of G. barbadense L. (Pima cotton) and two accessions of Gossypium sp. (unknown cotton), were analyzed. The fiber properties determined using the high volume instrument method included seven characteristics. All fiber properties were classified into five quality classes. The data on fiber quality properties were subjected to distribution, correlation, and canonical variable analysis. The results of fiber quality properties showed that the two accessions of Gossypium sp. (unknown cotton) can be promising options to be used as high-quality fiber progenies in crop genetic breeding programs or can be cultivated by regional farmers for the purpose of producing cotton with high fiber quality. Future investigations could utilize other methods of fiber quality analysis and compare the fiber quality of these cotton accessions native to the Peruvian Amazon region with other cotton species grown worldwide to improve the understanding of Pima cotton fiber quality and its applicability in different contexts of the textile industries.
Genetic diversity and population structure of a Peruvian cattle herd using SNP data
(Frontiers Media S.A., 2023-03-10) Corredor Arizapana, Flor Anita; Figueroa Venegas, Deyanira Antonella; Estrada Cañari, Richard; Salazar Coronel, Wilian; Quilcate Pairazamán, Carlos Enrique; Vásquez Pérez, Héctor Vladimir; Gonzales Malca, Jhony Alberto; Maicelo Quintana, Jorge Luis; Medina Morales, Percy Edilberto; Arbizu Berrocal, Carlos Irvin
New-generation sequencing technologies, among them SNP chips for massive genotyping, are useful for the effective management of genetic resources. To date, molecular studies in Peruvian cattle are still scarce. For the first time, the genetic diversity and population structure of a reproductive nucleus cattle herd of four commercial breeds from a Peruvian institution were determined. This nucleus comprises Brahman (N = 9), Braunvieh (N = 9), Gyr (N = 5), and Simmental (N = 15) breeds. Additionally, samples from a locally adapted creole cattle, the Arequipa Fighting Bull (AFB, N = 9), were incorporated. Female individuals were genotyped with the GGPBovine100K and ma les with the BovineHD. Quality control, and the proportion of polymorphic SNPs, minor allele frequency, expected heterozygosity, observed heterozygosity, and inbreeding coefficient were estimated for the five breeds. Admixture, principal component analysis (PCA), and discriminant analysis of principal components (DAPC) were performed. Also, a dendrogram was constructed using the Neighbor-Joining clustering algorithm. The genetic diversity indices in all breeds showed a high proportion of polymorphic SNPs, varying from 51.42% in Gyr to 97.58% in AFB. Also, AFB showed the highest expected heterozygosity estimate (0.41 ± 0.01), while Brahman the lowest (0.33 ± 0.01). Besides, Braunvieh possessed the highest observed heterozygosity (0.43 ± 0.01), while Brahman the lowest (0.37 ± 0.02), indicating that Brahman was less diverse. According to the molecular variance analysis, 75.71% of the variance occurs within individuals, whereas 24.29% occurs among populations. The pairwise genetic differentiation estimates (FST) between breeds showed values that ranged from 0.08 (Braunvieh vs. AFB) to 0.37 (Brahman vs. Braunvieh). Similarly, pairwise Reynold’s distance ranged from 0.09 (Braunvieh vs. AFB) to 0.46 (Brahman vs. Braunvieh). The dendrogram, similar to the PCA, identified two groups, showing a clear separation between Bos indicus (Brahman and Gyr) and B. taurus breeds (Braunvieh, Simmental, and AFB). Simmental and Braunvieh grouped closely with the AFB cattle. Similar results were obtained for the population structure analysis with K = 2. The results from this study would contribute to the appropriate management, avoiding loss of genetic variability in these breeds and for future improvements in this nucleus. Additional work is needed to speed up the breeding process in the Peruvian cattle system.
INIA 317 – Altiplano, variedad de papa con buena adaptación en la región altiplánica del Perú
(Asociación Latinoamericana de la Papa, 2016-05-24) Arcos Pineda, Jesus Heraclides; Gastelo, M.; Holguín Chuquimamani, Vitaliano
La papa constituye uno de los cultivos alimenticios más importantes en la agricultura familiar de la región andina del Perú. En las condiciones agroecológicas de esta región, uno de los factores más importantes que limita los niveles de producción y productividad de la papa es el clima adverso. Con el objetivo de lograr genotipos de papa; que, además, de tener buena capacidad de rendimiento, respondan mejor a los nuevos estreses abióticos y bióticos provocados por el cambio climático, el Centro Internacional de la Papa realizó cruzamientos entre los cultivares nativos pertenecientes a Solanum tuberosum subsp. andigena. La evaluación de los genotipos se realizó a partir del año 2000 en las diferentes localidades de la región andina. Desde del año 2005,la Estación Experimental Illpa-Puno del Instituto Nacional de Innovación Agraria (INIA) y el Centro Internacional de la Papa (CIP) dentro de las actividades del Proyecto ALTAGRO, evaluaron un grupo de estos clones en diversas comunidades de la Región Altiplánica del Perú, a través de la metodología de selección participativa, con el objetivo de obtener una variedad de papa con alta capacidad productiva, adaptada a las condiciones climáticas de la Región Altiplánica y con aptitud para procesamiento en tunta. Como resultado de este trabajo de investigación se ha logrado seleccionar un genotipo de papa adaptada a la Región Altiplánica del Perú, con alto potencial de rendimiento y alto contenido de materia seca. Este genotipo de papa inicialmente identificado como el clon 399085.30 (B1C5041.30), actualmente es denominado variedad INIA 317 – ALTIPLANO.
Liberación de la variedad “INIA 325 – PODEROSA”, ejemplo de esfuerzo conjunto público -privado en la sierra norte del Perú
(Asociación Latinoamericana de la Papa, 2018-08-27) Otiniano, José R.; Cabrera Hoyos, Héctor Antonio; Pérez, Juan M.; Sánchez, Henry C.; Gastelo, Manuel
INIA 325 – PODEROSA es una variedad resistente al tizón tardío de la papa y se constituye en un claro ejemplo y producto de la alianza estratégica público – privado, en la cual instituciones con intereses comunes se unen para solucionar un problema. En la sierra norte del Perú, sólo en las regiones de La Libertad, Cajamarca y Ancash se siembran anualmente más de 60,000 ha de papa y su principal limitante es el tizón tardío, que incluso puede causar la pérdida total del cultivo. El año 2011, la Asociación Pataz, el Centro Internacional de la Papa (CIP), Instituto Nacional de Innovación Agraria (INIA), la Municipalidad Distrital de Chugay y productores de la zona, unieron sus esfuerzos y empezaron a realizar experimentos participativos para evaluar 13 clones pertenecientes a la población de mejoramiento B1C5 del CIP. Esta población se caracteriza por su alta resistencia al tizón tardío, altos rendimientos y buena calidad culinaria. En diciembre del 2014, este trabajo coordinado dio su fruto al liberarse la variedad “INIA 325-Poderosa” (CIP 399049.22) para beneplácito de los agricultores de la región norte del Perú. Actualmente, como parte de esta alianza público-privado se están realizando otros trabajos de selección participativa para obtener variedades de papa con resistencia al tizón tardío, al calor y a las heladas.