Examinando por Autor "Fernandez Huaytalla, Elizabeth"

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Comprehensive Morpho-Functional Profiling of Peruvian Andean Capsicum pubescens Germplasm Reveals Promising Accessions with High Agronomic and Nutraceutical Value
(MDPI, 2026-01-17) Salas Zeta, Erick Leao; Bernal Canales, Katherine Lisbeth; Delgado Lazo, Andrea Graciela; Pacheco Lizárraga, Gonzalo Antonio; Hermoza Gutiérrez, Marián; Cántaro Segura, Hector Baroni; Fernandez Huaytalla, Elizabeth; Gutiérrez Reynoso, Dina Lida; Quispe Jacobo, Fredy Enrique; Ccapa Ramírez, Karina Beatriz
Capsicum pubescens (rocoto) is an Andean domesticate with notable agronomic and nutraceutical potential, yet it remains underrepresented in chili pepper breeding programs. In this study, 78 accessions from the Peruvian Andes were evaluated in a single field environment during the 2024 growing season for 28 variables spanning plant architecture, phenology and yield, color (CIELAB), weight, fruit morphology, physicochemical variables, and functional phytochemicals, including total phenolics, carotenoids, ascorbic acid, capsaicinoids, and antioxidant activity (FRAP, DPPH, ABTS). Descriptive analyses revealed broad phenotypic diversity in key variables such as yield and bioactive compounds. Spearman correlations uncovered a clear modular structure, with strong within-domain associations across morphological, chromatic, and biochemical variables, and statistically significant but low-magnitude cross-domain associations (e.g., fruit length with pungency, redness with total phenolics). Principal component analysis and hierarchical clustering resolved three differentiated phenotypic profiles: (i) low-pungency accessions with high soluble solids and varied fruit colors; (ii) highly pungent materials with elevated antioxidant capacity; and (iii) large, red-fruited accessions with considerable carotenoid content and high moisture. This multivariate architecture revealed weak cross-block correlations among agronomic, color, and functional traits, enabling selection of promising accessions combining desirable agronomic attributes and favorable bioactive profiles in specific accessions. These results provide a quantitative foundation for future breeding strategies in C. pubescens, opening concrete opportunities to develop improved cultivars that simultaneously meet productivity and functional quality criteria.
First report of cassava common mosaic disease and Cassava Common Mosaic Virus infecting cassava (Manihot esculenta) in Peru
(American Phytopathological Society, 2017-04-03) Fernandez Huaytalla, Elizabeth; Espinoza, Ivonne; Lozano, Ivan; Bolaños, Carmen; Carvajal Yepes, Monica; Cuellar, Wilmer
Cassava common mosaic disease (CCMD) can cause root yield losses of approximately 30% (Venturini et al. 2016) in cassava (Manihot esculenta Crantz) and it has already been reported in Brazil, Colombia, Paraguay, and Argentina (Calvert et al. 2012; Di Feo et al. 2015). Most of Peru’s cassava production is in the eastern side of the country (the rainforest region) and is mainly used for direct human consumption. Cultivated area in these regions is approximately 48.1 thousand hectares (MINAGRI 2015). CCMD is caused by Cassava common mosaic virus (CsCMV; Calvert et al. 1996), a mechanically transmitted potexvirus that can be disseminated via infected stem cuttings used for cassava propagation. Given the presence of the disease in neighboring countries, a field survey for virus diseases in cassava was organized during June 2016 in the province of Huaral, in the central coast of Peru, where typical leaf mosaic and leaf deformation symptoms associated to CCMD were observed in local cassava varieties. To verify the presence of CsCMV and CCMD in Peru, the youngest leaves of four plants showing virus-like symptoms and four plants not showing symptoms were collected from one of the affected fields and dried in silica gel for analysis. Double antibody sandwich (DAS)-ELISA tests using a polyclonal antiserum readily detected CsCMV in all symptomatic samples (Nolt et al. 1991). In addition, mechanical transmissions to the experimental host Nicotiana benthamiana induced typical systemic leaf mosaic. RT-PCR tests targeting the replicase region of CsCMV were carried out using primers CsCMV-3269-F: 5′-GAGGCTCTTCTCTGGGAAAC-3′ and CsCMV-3896-R: 5′-CTTGAGTCCAGTTTGATGTC-3′, designed using an alignment of CsCMV-related sequences available in GenBank. An expected PCR fragment of 627 bp was obtained only in samples showing symptoms of CCMD. RT-PCR tests for other cassava-infecting viruses reported in the Americas (Carvajal-Yepes et al. 2014) were negative in these samples. PCR products from two independent CsCMV-positive samples were sent for direct Sanger-sequencing (Macrogen, Korea). CsCMV sequence isolates from Peru (GenBank accession nos. KX964625 and KX964626) show a nucleotide identity of 88 to 93%, and an amino acid sequence identity of 99% with other CsCMV sequences available in GenBank, and phylogenetic analysis clustered Peruvian isolates with CsCMV sequences reported in cassava. These results stress the need to implement surveillance activities and quick diagnostic protocols, as the inadvertent propagation and accumulation of virus infections could cause an increasingly negative effect on cassava and other vegetatively propagated crops.
Morpho-Physicochemical, Bioactive, and Antioxidant Profiling of Peruvian Coffea arabica L. Germplasm Reveals Promising Accessions for Agronomic and Nutraceutical Breeding
(MDPI, 2025-12-19) Cueva Carhuatanta, César Aldair; Choque Incaluque, Ester Maryeta; Carrera Rojo, Ronald Pío; Maraví Loyola, Jazmín Yurema; Hermoza Guitiérrez, Marián; Cántaro Segura, Hector Baroni; Fernandez Huaytalla, Elizabeth; Gutiérrez Reynoso, Dina Lina; Quispe Jacobo, Fredy Enrique; Ccapa Ramírez, Karina Beatriz
Coffee quality arises from the interaction among genotype, environment, and postharvest management, yet few large-scale studies jointly integrate agronomic, phytochemical, and processing traits. We characterized 150 Coffea arabica L. accessions from six Peruvian regions, evaluated in the INIA coffee germplasm collection, quantifying agro-morphological traits, colorimetric parameters in cherries and beans, fermentation indicators, bioactive compounds, and antioxidant activity. Correlation analyses showed that total phenolics (TPCs) and total flavonoids (TFCs) were strongly associated with antioxidant activity, whereas caffeine content (CAF) varied, largely independently. Several chromatic parameters in parchment and green coffee (a*, b*, C*) showed positive correlations with phenolic content and antioxidant activity (ABTS, DPPH, FRAP), while final fermentation pH (FPH) was negatively associated with these compounds, supporting both color metrics and pH as operational indicators of chemical quality. Principal component analysis disentangled a morphometric gradient from a functional (phenolic–antioxidant) gradient, indicating that bean size and antioxidant potential can be improved in a semi-independent manner. Hierarchical clustering identified complementary ideotypes, and a multi-trait selection index highlighted promising accessions—PER1002197 (Cajamarca), PER1002222 (Cajamarca), PER1002288 (Pasco), and PER1002184 (Cajamarca)—that combine high phenolic/antioxidant levels, favorable chlorogenic acid (CGA)/trigonelline (TGN) profiles, contrasting (high/low) caffeine, and competitive yield (YPP)/bean size. These accessions represent promising candidates for breeding climate-smart and nutraceutical-oriented coffee.
Morpho-Physiological response of four native accessions of Phaseolus vulgaris L. subjected to water stress under greenhouse conditions in northeastern Peru
(MDPI, 2024-09-06) Santillan Huaman, Anlly; Tejada Alvarado, José Jesús; García, Ligia; Vásquez García, Jheiner; Fernandez Huaytalla, Elizabeth; Vilca Valqui, Nuri Carito; Oliva Cruz, Manuel
Phaseolus vulgaris L. is a legume of high nutraceutical value, widely cultivated and consumed. However, common bean production faces challenges such as water stress that severely affects its growth and yield. This study evaluated the morphological and physiological response of four native P. vulgaris accessions subjected to different irrigation treatments under greenhouse conditions. A completely randomized design with factorial arrangement was used, evaluating three irrigation frequencies (100%, 50%, 25%) in combination with four accessions (PER1003541, PER1003542, PER1003543, PER1003544). The results showed that with the 25% irrigation treatment, PER1003544 showed a 54.62% decrease in leaf area, while PER1003542 and PER1003543 experienced reductions of 56.56% and 59.24%, respectively. In addition, accession PER1003544 reported a smaller reduction in the number of flowers and pods, with decreases of 40.21% and 29.9%, in contrast to PER1003543, which showed decreases of 60.66% and 52.63%, respectively. Accessions PER1003541 and PER1003544 also recorded the lowest reductions in dry biomass, with 31.85%and 35.41%, respectively. Regarding yield, PER1003544 and PER1003541 experienced reductions of 59.01% and 69.79%, respectively, unlike PER1003543, which showed a 90% decrease. In relation to stomatal density, PER1003541 recorded a reduction of 28.28%, while PER1003544 had a decrease of 37.10%, and PER1003543 experienced a reduction of 47.05%; chlorophyll content showed a similar trend. Finally, PER1003544 maintained a relatively stable stomatal index, with a reduction of 29.01%, compared to PER1003543, which reduced by 60.99%. In conclusion, accession PER1003544 stands out as a promising variety for breeding programs focused on water stress tolerance, contributing to food security and agricultural sustainability in areas affected by limited water availability. However, PER1003541 would be a suitable additional option, offering farmers flexibility in their crop selection according to the specific conditions of their environment.
Multi-Year Assessment of Phenotypic Variability and Stability in 49 Peruvian Grapevine (Vitis spp.) Accessions Using AMMI, GGE, and WAASBY Models
(MDPI, 2025-12-23) Ccapa Ramírez, Karina Beatriz; Tarazona Ramírez, Cesar Mario; Carrillo Zavala, Pedro Víctor; Cueva Carhuatanta, César Aldair; Aybar Peve, Leandro Joel; Saenz Rodriguez, Hanz; Hermoza Gutiérrez, Marián Alicia; Cántaro Segura, Hector Baroni; Fernandez Huaytalla, Elizabeth; Gutiérrez Reynoso, Dina Lida; Quispe Jacobo, Fredy Enrique
Grapevines face the dual challenge of sustaining yield and fruit quality under arid and increasingly variable environmental conditions. This study characterized the phenotypic variability and multi-year stability of 49 grapevine (Vitis spp.) accessions conserved in the Chincha germplasm bank over three consecutive growing seasons, with the aim of identifying promising material for table grape, pisco (a traditional grape-based distille spirit from Peru), and wine production. Morphological traits (cluster weight, berry weight and dimensions), colorimetric parameters (CIELAB), and physicochemical attributes (moisture, dry matter, soluble solids, pH, titratable acidity, maturity index, and reducing sugars) were evaluated. Multivariate analyses (PCA, hierarchical clustering), genotype × environment interaction models (AMMI and GGE), stability indices (ASV and WAASBY), and assessments of interannual stability were applied, together with a multi-criteria selection index tailored to the intended end use. The results revealed two contrasting phenotypic profiles: one characterized by high berry volume/weight and elevated water content and another with smaller berries but higher dry matter, sugars, balanced acidity, and superior maturity indices. Genotypic effects were predominant for size-related traits such as berry weight, whereas titratable acidity and reducing sugars exhibited a more pronounced genotype × year interaction, supporting the use of AMMI models and the WAASBY index to select genotypes that are both productive and stable. The ranking identified accessions PER1002061, PER1002062, and PER1002168 as outstanding candidates for table grape production; PER1002076, PER1002097, and PER1002156 for pisco; and PER1002122, PER1002131, PER1002135, and PER1002098 as accessions with high oenological potential. Overall, these findings highlight the value and diversity of Peruvian grapevine germplasm and provide a foundation for breeding programs targeting varieties adapted to specific market niches, including table grape, wine, and pisco.
Strengthening national genebanks through genomics and regional collaboration: Lessons from Latin America and the Caribbean
(Elsevier B.V., 2025-12-23) Carbajal Yepes, M.; Petroli, C.; Correa, M.; Breseghello, F.; Tapia, G.; Salazar, E.; Chassaigne, A.; Ferreyra, M.; Reyes Herrera, P.H.; Guzmán, M.; Mendoza, A.; Vidal, R.; Condón, F.; de Almeida, N.; Fernandez Huaytalla, Elizabeth; Rodriguez, L.; Solano, W.; Morales, A.J.; Velasquez Flores, B.L.; Soto, J.; Robles, R.; Ledesma, A.; Aragón, M.; Castillo, D.; Roa, C.; López Noriega, I.; Wenzl, P.; Sansaloni, C.
Latin America and the Caribbean (LAC) is a center of origin and domestication for globally important crops such as cassava, common bean, maize, and potato, all of which are key to food and nutrition security worldwide. Despite this strategic role, many national genebanks in the region face technical, financial, and policy barriers that limit the use of genomic tools for characterization and conservation. These genebanks safeguard the genetic diversity needed to enhance crop yields, climate-change resilience, nutritional quality, and pest and disease resistance. In 2022, CGIAR Centers and partners established the "Community of Practice (CoP) of national genebanks in LAC" to strengthen regional capacity for generating and interpreting digital sequence information (DSI), facilitate collaboration, and promote sustainable management of plant genetic resources. Through coordinated capacity-building activities, joint crop-based analyses, and shared learning, the CoP has connected 17 institutions across 13 countries. Members have begun generating and interpreting DSI for common bean, maize, and potato, while addressing gaps in data sharing, interoperability, and policy frameworks. Looking ahead, the CoP seeks to conduct diversity analysis, establish regional core collections, integrate existing global data portals, and advocate for policy alignment to sustain genomic characterization and access to diversity. This CoP initiative provides a model applicable in other regions to strengthen genebank operations through collaborative innovation and coordinated action, contributing to resilient and equitable global food systems.
The complete chloroplast genome of a centennial olive tree (Olea europaea, Oleaceae) from the southern Peruvian coast
(F1000Research, 2024-12-04) Saldaña, Carla L.; Chura Llanos, Luz S.; Estrada Cañari, Richard; Fernandez Huaytalla, Elizabeth; Zirena Vilca, Franz; Guerrero Abad, Juan Carlos; Amasifuen Guerra, Carlos Alberto; Gutierrez Reynoso, Dina Lida; Injante Silva, Pedro Hugo; Arbizu, Carlos I
Olive (Olea europaea Linaeus 1753) is one of the valuable fruit trees and very important edible oil plant in the world. The chloroplast (cp) genome of an olive tree (Olea europaea) from the southern Peruvian arid coast was obtained for the first time. Genomic DNA of high quality was used to generate librarieswith Illumina Hiseq paired-end methods. The cp genome is 155,886 pb in length and contains a large single-copy region (LSC) of 86,610 pb and a small single copy region (SSC) of 17,790 pb separated by two inverted repeat (IR) regions (25,741bp). The cp genome of olive contains 124 genes that consists of 80 protein-coding genes, 36 tRNA, eight rRNA. Phylogenetic analysis showed this olive tree is sister to O. europaea subsp. maroccana ( Oleeae tribe). This study presents the first overview of the chloroplast genome organization and phylogenetics of O. europaea, offering valuable insights for genetic and evolutionary research in the genus Olea.
Uso de maracuyá (Passiflora edulis f. flavicarpa) como portainjerto para la propagación de especies de Passiflora supersect. Tacsonia colectadas en Perú
(Universidad Nacional Agraria La Molina, Facultad de Ciencias Forestales, 2024-02-05) Chávez Corcuera, Gonzalo; Torres Chacón, Rosmery; Fernandez Huaytalla, Elizabeth; Elías Da Silva, Rosa Angelica; Gutiérrez Reynoso, Dina Lida
Las especies de Passiflora supersect. Tacsonia (Juss.) Feuillet & J.M. MacDougal son plantas adaptadas a los ecosistemas andinos que producen frutos comestibles. Estos son cultivados y comercializados a pequeña escala para su consumo como fruta fresca y para la elaboración de postres y bebidas. Ante las fuertes perturbaciones antrópicas y ambientales que sufre el hábitat natural de las especies de Passiflora L., la extinción parcial o total de ellas es una realidad latente. Por ello, con el fin de conservar estos recursos en Bancos de Germoplasma, es necesario el desarrollo de métodos óptimos para la propagación de las distintas especies. Con la intención de conservar ex situ, en la Colección de Passiflora del Banco de Germoplasma del Instituto Nacional de Innovación Agraria (INIA) a las especies de Passiflora supersect. Tacsonia, se verificó la viabilidad del uso de Passiflora edulis f. flavicarpa O. Deg. como portainjerto para la propagación asexual de seis taxa seleccionados. Passiflora tripartita var. mollissima (Kunth) Holm-Niels. & P. Jørg., P. cumbalensis (H. Karst.) Harms, P. pinnatistipula Cav., P. tarminiana Coppens & V.E. Barney, P. peduncularis Cav. y P. trifoliata Cav. var. trifoliata fueron injertados en P. edulis f. flavicarpa obteniendo un éxito de prendimiento y aclimatación óptima para todos los taxa seleccionados. Adicionalmente, todos los taxa con excepción de P. trifoliata var. trifoliata produjeron flores y frutos. Finalmente, este es el primer registro de propagación y cultivo exitoso para P. trifoliata y P. peduncularis, ambas especies endémicas de Perú, en un hábitat cercano al nivel del mar.