Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper

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dc.contributor.authorArbizu Berrocal, Carlos Irvin
dc.contributor.authorSaldaña Serrano, Carla Lizet
dc.contributor.authorFerro Mauricio, Rubén Darío
dc.contributor.authorChávez Galarza, Julio César
dc.contributor.authorHerrera Flores, Jordán Valentín
dc.contributor.authorContreras Liza, Sergio
dc.contributor.authorGuerrero Abad, Juan Carlos
dc.contributor.authorMaicelo Quintana, Jorge Luis
dc.coverage.spatialPerúes_PE
dc.date.accessioned2022-03-02T23:27:42Z
dc.date.available2022-03-02T23:27:42Z
dc.date.issued2022-01-05
dc.description.abstractIn this study, we sequenced the first complete chloroplast (cp) genome of a Peruvian chili pepper landrace, “arnacucho” (Capsicum chinense). This cp genome has a 156,931 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (87,325 bp) and a 17,912 bp small single-copy (SSC) region, separated by two inverted repeat (IR) regions (25,847 bp); and the percentage of GC content was 37.71%. Arnaucho chili pepper chloroplast genome possesses 133 genes that consists of 86 protein-coding genes, 37 tRNA, eight rRNA, and two pseudogenes. Phylogenetic analysis revealed that this Peruvian chili pepper landrace is closely related to the undomesticated species C. galapagoense; all belong to the Capsiceae tribe.es_PE
dc.formatapplication/pdfes_PE
dc.identifier.citationCarlos I. Arbizu, Carla L. Saldaña, Rubén D. Ferro-Mauricio, Julio C. Chávez- Galarza, Jordan Herrera, Sergio Contreras-Liza, Juan C. Guerrero-Abad & Jorge L. Maicelo (2022) Characterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepper, Mitochondrial DNA Part B, 7:1, 156-158, doi: 10.1080/23802359.2021.2014366es_PE
dc.identifier.doihttps://doi.org/10.1080/23802359.2021.2014366
dc.identifier.journalMitochondrial DNA Part Bes_PE
dc.identifier.urihttps://hdl.handle.net/20.500.12955/1631
dc.language.isoenges_PE
dc.publisherTaylor & Francis Groupes_PE
dc.publisher.countryReino Unidoes_PE
dc.relation.ispartofMitochondrial DNA Part B, 7:1, 156-158es_PE
dc.relation.publisherversionhttps://doi.org/10.1080/23802359.2021.2014366es_PE
dc.rightsinfo:eu-repo/semantics/openAccesses_PE
dc.rights.urihttps://creativecommons.org/licenses/by-nc-nd/4.0/es_PE
dc.sourceInstituto Nacional de Innovación Agrariaes_PE
dc.source.uriRepositorio Institucional - INIAes_PE
dc.subjectNGSes_PE
dc.subjectChloroplastes_PE
dc.subjectGenetic resourceses_PE
dc.subjectArnauchoes_PE
dc.subjectPhylogenomicses_PE
dc.subject.ocdehttps://purl.org/pe-repo/ocde/ford#4.04.00es_PE
dc.titleCharacterization of the complete chloroplast genome of a Peruvian landrace of Capsicum chinense Jacq. (Solanaceae), arnaucho chili pepperes_PE
dc.typeinfo:eu-repo/semantics/articlees_PE

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