Examinando por Autor "Poemape Tuesta, Carlos Augusto"

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Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
(John Wiley & Sons Inc., 2023-06-06) Paredes Espinosa, Richard; Gutiérrez Reynoso, Dina Lida; Atoche Garay, Diego Fernando; Mansilla Córdova, Pedro Javier ; Abad Romaní, Yudi Gertrudis; Girón Aguilar, Rita Carolina; Flores Torres, Itala; Montañez Artica, Ana Gabriela; Arbizu Berrocal, Carlos Irvin; Amasifuen Guerra, Carlos Alberto; Maicelo Quintana, Jorge Luis; Poemape Tuesta, Carlos Augusto; Guerrero Abad, Juan Carlos
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
(John Wiley & Sons Inc., 2023-04-04) Paredes Espinosa, Richard; Gutiérrez Reynoso, Dina Lida; Atoche Garay, Diego Fernando; Abad Romaní, Yudi Gertrudis; Girón Aguilar, Rita Carolina; Flores Torres, Itala; Montañez Artica, Ana Gabriela; Arbizu Berrocal, Carlos Irvin; Amasifuen Guerra, Carlos Alberto; Poemape Tuesta, Carlos Augusto; Guerrero Abad, Juan Carlos
Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.
The complete mitochondrial genome of a Peruvian creole cattle (Bos taurus) and its phylogenetic analysis
(Wageningen Academic Publishers, 2023-02-09) Arbizu Berrocal, Carlos Irvin; Ferro Mauricio, Rubén Darío; Chávez Galarza, Julio César; Vásquez Pérez, Héctor Vladimir; Maicelo Quintana, Jorge Luis; Poemape Tuesta, Carlos Augusto; Gonzáles, J.; Quilcate Pairazamán, Carlos Enrique; Corredor Arizapana, Flor Anita
The population of Peruvian creole cattle (PCC) is decreasing mainly due to the introduction of more productive breeds in recent years. We report the complete mitochondrial genome sequence of a PCC bull for the first time. This genome was 16,339 bp in length with the base composition 31.43% A, 28.64% T, 26.81% C, and 13.12% G. It contained 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes and a control region. Among the 37 genes, 28 were positioned on the H-strand and 9 were positioned on the L-strand. The most frequently used codons were CUA (Leucine), AUA (Isoleucine), AUU (Isoleucine), AUC (Isoleucine) and ACA (Threonine). Maximum likelihood analysis clearly demonstrated that PCC are strongly related to a native African breed, giving insights into the maternal ancestry of PCC. The annotated mitochondrial genome of PCC would serve as an important genetic data set for further breeding work and conservation strategies.
Draft genome sequence resource of Erwinia sp. Strain INIA01, a phytopathogen isolated from a diseased stalk of peruvian maize
(Microbiology resource announcements, 2023-04-13) Estrada Cañari, Richard; Saldaña Serrano, Carla Lizet; Pérez Porras, Wendy Elizabeth; Arteaga, Linda; Martínez Vidal, Gabriel; Injante Silva, Pedro Hugo; Duran Gomez, Moises Rodrigo; Salazar Coronal, Wilian; Cosme de la Cruz, Roberto Carlos; Poemape Tuesta, Carlos Augusto; Arbizu Berrocal, Carlos Irvin
Here, we report the complete genome sequence of Erwinia sp. strain INIA01, a bacterium isolated from lesions of Zea mays from northern Peru. This genome possesses two circular replicons, a 4.2-Mb chromosome, and a 438-kb plasmid.
The Complete Mitochondrial Genome of a Neglected Breed, the Peruvian Creole Cattle (Bos taurus), and Its Phylogenetic Analysis
(MDPI, 2022-06-06) Arbizu Berrocal, Carlos Irvin; Ferro Mauricio, Rubén Darío; Chávez Galarza, Julio César; Vásquez Pérez, Héctor Vladimir; Maicelo Quintana, Jorge Luis; Poemape Tuesta, Carlos Augusto; Gonzales, Jhony; Quilcate Pairazamán, Carlos Enrique; Corredor Arizapana, Flor Anita
Cattle spread throughout the American continent during the colonization years, originating creole breeds that adapted to a wide range of climate conditions. The population of creole cattle in Peru is decreasing mainly due to the introduction of more productive breeds in recent years. During the last 15 years, there has been significant progress in cattle genomics. However, little is known about the genetics of the Peruvian creole cattle (PCC) despite its importance to (i) improving productivity in the Andean region, (ii) agricultural labor, and (iii) cultural traditions. In addition, the origin and phylogenetic relationship of the PCC are still unclear. In order to promote the conservation of the PCC, we sequenced the mitochondrial genome of a creole bull, which also possessed exceptional fighting skills and was employed for agricultural tasks, from the highlands of Arequipa for the first time. The total mitochondrial genome sequence is 16,339 bp in length with the base composition of 31.43% A, 28.64% T, 26.81% C, and 13.12% G. It contains 13 protein-coding genes, 2 ribosomal RNA genes, 22 transfer RNA genes, and a control region. Among the 37 genes, 28 were positioned on the H-strand and 9 were positioned on the L-strand. The most frequently used codons were CUA (leucine), AUA (isoleucine), AUU (isoleucine), AUC (isoleucine), and ACA (threonine). Maximum likelihood reconstruction using complete mitochondrial genome sequences showed that the PCC is related to native African breeds. The annotated mitochondrial genome of PCC will serve as an important genetic data set for further breeding work and conservation strategies.